Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upb1Q8VC97 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upb1Q8VC97 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Upb1Q8VC97 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.52■□□□□ 0.56
Upb1Q8VC97 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
Upb1Q8VC97 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Upb1Q8VC97 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Upb1Q8VC97 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.51■□□□□ 0.55
Upb1Q8VC97 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Upb1Q8VC97 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.5■□□□□ 0.55
Upb1Q8VC97 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.5■□□□□ 0.55
Upb1Q8VC97 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.5■□□□□ 0.55
Upb1Q8VC97 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Upb1Q8VC97 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Upb1Q8VC97 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Gm33142-201ENSMUST00000193913 867 ntBASIC18.48■□□□□ 0.55
Upb1Q8VC97 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Upb1Q8VC97 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.47■□□□□ 0.55
Upb1Q8VC97 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Upb1Q8VC97 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms