Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps39Q8R5L3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Gm12527-201ENSMUST00000117967 564 ntBASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps39Q8R5L3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Gm43183-201ENSMUST00000200632 547 ntBASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.09■□□□□ 0.33
Vps39Q8R5L3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Vps39Q8R5L3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Vps39Q8R5L3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Gm15378-201ENSMUST00000121894 207 ntBASIC17.08■□□□□ 0.32
Vps39Q8R5L3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Vps39Q8R5L3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Vps39Q8R5L3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Gm5643-201ENSMUST00000117081 966 ntBASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.06■□□□□ 0.32
Vps39Q8R5L3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms