Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H2afjQ8R1M2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Mtag2-201ENSMUST00000058665 714 ntBASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.86■□□□□ 0.13
H2afjQ8R1M2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
H2afjQ8R1M2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
H2afjQ8R1M2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Gm10138-203ENSMUST00000206952 366 ntBASIC15.84■□□□□ 0.13
H2afjQ8R1M2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
H2afjQ8R1M2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
H2afjQ8R1M2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afjQ8R1M2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afjQ8R1M2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
H2afjQ8R1M2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
H2afjQ8R1M2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Gm12896-201ENSMUST00000118430 226 ntBASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H2afjQ8R1M2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Mir6349-201ENSMUST00000184059 97 ntBASIC15.82■□□□□ 0.12
H2afjQ8R1M2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms