Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vopp1Q8R1C3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
Vopp1Q8R1C3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Gm24589-201ENSMUST00000116692 94 ntBASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vopp1Q8R1C3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vopp1Q8R1C3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vopp1Q8R1C3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vopp1Q8R1C3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vopp1Q8R1C3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vopp1Q8R1C3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Gm12895-201ENSMUST00000122214 226 ntBASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vopp1Q8R1C3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vopp1Q8R1C3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms