Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3a1Q8K4Z5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3a1Q8K4Z5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sf3a1Q8K4Z5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Sf3a1Q8K4Z5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sf3a1Q8K4Z5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sf3a1Q8K4Z5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.83■□□□□ 0.92
Sf3a1Q8K4Z5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sf3a1Q8K4Z5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sf3a1Q8K4Z5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sf3a1Q8K4Z5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Sf3a1Q8K4Z5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Gm6433-201ENSMUST00000118634 875 ntBASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Gm7889-201ENSMUST00000185591 958 ntBASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sf3a1Q8K4Z5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Sf3a1Q8K4Z5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms