Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col23a1Q8K4G2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Gm14140-201ENSMUST00000119999 995 ntBASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Gm9727-201ENSMUST00000161387 555 ntBASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.74■□□□□ 0.91
Col23a1Q8K4G2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col23a1Q8K4G2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col23a1Q8K4G2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Gm4535-201ENSMUST00000182274 558 ntBASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Gm10355-201ENSMUST00000097146 517 ntBASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col23a1Q8K4G2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.7■□□□□ 0.91
Col23a1Q8K4G2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Gm25911-201ENSMUST00000157621 56 ntBASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Gm25745-201ENSMUST00000174945 133 ntBASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Gm6089-201ENSMUST00000197666 938 ntBASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col23a1Q8K4G2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Gm7506-201ENSMUST00000207758 815 ntBASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col23a1Q8K4G2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms