Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rtn4rl1Q8K0S5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rtn4rl1Q8K0S5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rl1Q8K0S5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rtn4rl1Q8K0S5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Rtn4rl1Q8K0S5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.21■□□□□ 0.34
Rtn4rl1Q8K0S5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rtn4rl1Q8K0S5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Iqck-206ENSMUST00000208658 2891 ntBASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rtn4rl1Q8K0S5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm12644-201ENSMUST00000119935 606 ntBASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rtn4rl1Q8K0S5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtn4rl1Q8K0S5 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms