Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.29■□□□□ 0.2
CroccQ8CJ40 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CroccQ8CJ40 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.28■□□□□ 0.2
CroccQ8CJ40 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CroccQ8CJ40 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.27■□□□□ 0.2
CroccQ8CJ40 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CroccQ8CJ40 Gm30025-201ENSMUST00000218555 728 ntBASIC16.27■□□□□ 0.2
CroccQ8CJ40 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CroccQ8CJ40 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CroccQ8CJ40 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.26■□□□□ 0.19
CroccQ8CJ40 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.26■□□□□ 0.19
CroccQ8CJ40 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.26■□□□□ 0.19
CroccQ8CJ40 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.26■□□□□ 0.19
CroccQ8CJ40 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CroccQ8CJ40 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CroccQ8CJ40 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CroccQ8CJ40 Gm7791-201ENSMUST00000219066 539 ntBASIC16.24■□□□□ 0.19
CroccQ8CJ40 Il3ra-202ENSMUST00000223589 738 ntBASIC16.24■□□□□ 0.19
CroccQ8CJ40 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CroccQ8CJ40 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CroccQ8CJ40 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms