Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rfwd3Q8CIK8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.04■□□□□ 0.16
Rfwd3Q8CIK8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rfwd3Q8CIK8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.02■□□□□ 0.16
Rfwd3Q8CIK8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rfwd3Q8CIK8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Gm37025-201ENSMUST00000195159 829 ntBASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.01■□□□□ 0.15
Rfwd3Q8CIK8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms