Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Gm29518-201ENSMUST00000190858 372 ntBASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rftn2Q8CHX7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Gm14859-201ENSMUST00000117752 357 ntBASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rftn2Q8CHX7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Gm17808-201ENSMUST00000200859 894 ntBASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rftn2Q8CHX7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Gm11950-201ENSMUST00000121615 838 ntBASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rftn2Q8CHX7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Gm18115-201ENSMUST00000221209 621 ntBASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rftn2Q8CHX7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rftn2Q8CHX7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rftn2Q8CHX7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rftn2Q8CHX7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rftn2Q8CHX7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rftn2Q8CHX7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms