Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Gm10517-202ENSMUST00000192970 758 ntBASIC15.22■□□□□ 0.03
ShfQ8CG80 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.22■□□□□ 0.03
ShfQ8CG80 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShfQ8CG80 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.21■□□□□ 0.03
ShfQ8CG80 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.21■□□□□ 0.03
ShfQ8CG80 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShfQ8CG80 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
ShfQ8CG80 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ShfQ8CG80 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.2■□□□□ 0.02
ShfQ8CG80 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gm17661-201ENSMUST00000170317 270 ntBASIC15.2■□□□□ 0.02
ShfQ8CG80 Gm27275-201ENSMUST00000184318 272 ntBASIC15.2■□□□□ 0.02
ShfQ8CG80 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.2■□□□□ 0.02
ShfQ8CG80 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.2■□□□□ 0.02
ShfQ8CG80 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ShfQ8CG80 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.19■□□□□ 0.02
ShfQ8CG80 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.19■□□□□ 0.02
ShfQ8CG80 Gm18666-201ENSMUST00000190039 958 ntBASIC15.19■□□□□ 0.02
ShfQ8CG80 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.19■□□□□ 0.02
ShfQ8CG80 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ShfQ8CG80 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ShfQ8CG80 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Gm37025-201ENSMUST00000195159 829 ntBASIC15.18■□□□□ 0.02
ShfQ8CG80 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
ShfQ8CG80 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ShfQ8CG80 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms