Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc5Q8CG46 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
Smc5Q8CG46 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Gm17661-201ENSMUST00000170317 270 ntBASIC21.1■□□□□ 0.97
Smc5Q8CG46 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 AC069562.2-201ENSMUST00000224644 2146 ntBASIC21.1■□□□□ 0.97
Smc5Q8CG46 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc5Q8CG46 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Gm12382-201ENSMUST00000122005 922 ntBASIC21.09■□□□□ 0.97
Smc5Q8CG46 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.09■□□□□ 0.97
Smc5Q8CG46 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc5Q8CG46 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Gm20049-201ENSMUST00000219950 730 ntBASIC21.08■□□□□ 0.97
Smc5Q8CG46 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc5Q8CG46 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc5Q8CG46 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc5Q8CG46 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms