Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb7Q8CDY9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb7Q8CDY9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb7Q8CDY9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb7Q8CDY9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms