Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc38Q8CDN8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Gm17661-201ENSMUST00000170317 270 ntBASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc38Q8CDN8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc38Q8CDN8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Gm37025-201ENSMUST00000195159 829 ntBASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc38Q8CDN8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc38Q8CDN8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc38Q8CDN8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Ccdc38Q8CDN8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc38Q8CDN8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Gm13216-201ENSMUST00000117145 591 ntBASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc38Q8CDN8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc38Q8CDN8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms