Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Mir6349-201ENSMUST00000184059 97 ntBASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lysmd4Q8CC84 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm10849-201ENSMUST00000100397 618 ntBASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm26524-201ENSMUST00000192339 390 ntBASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm42569-201ENSMUST00000200539 472 ntBASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Lysmd4Q8CC84 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lysmd4Q8CC84 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lysmd4Q8CC84 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms