Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Slc46a2Q8CA03 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Slc46a2Q8CA03 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Slc46a2Q8CA03 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Slc46a2Q8CA03 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc46a2Q8CA03 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc46a2Q8CA03 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Mtag2-201ENSMUST00000058665 714 ntBASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc46a2Q8CA03 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms