Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Dio3-201ENSMUST00000097228 1449 ntBASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rfx6Q8C7R7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx6Q8C7R7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Gm37179-201ENSMUST00000194862 823 ntBASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx6Q8C7R7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx6Q8C7R7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx6Q8C7R7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx6Q8C7R7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms