Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim9Q8C7M3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim9Q8C7M3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim9Q8C7M3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.78■□□□□ 0.6
Trim9Q8C7M3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.78■□□□□ 0.6
Trim9Q8C7M3 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim9Q8C7M3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim9Q8C7M3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trim9Q8C7M3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trim9Q8C7M3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.77■□□□□ 0.59
Trim9Q8C7M3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim9Q8C7M3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms