Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm2399-201ENSMUST00000104944 225 ntBASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rft1Q8C3B8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rft1Q8C3B8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Gm27275-201ENSMUST00000184318 272 ntBASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Gm8520-201ENSMUST00000186517 868 ntBASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rft1Q8C3B8 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rft1Q8C3B8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.21■□□□□ 0.02
Rft1Q8C3B8 Flg-201ENSMUST00000050758 1488 ntBASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Tgds-204ENSMUST00000228543 1594 ntBASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms