Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smim4Q8C1Q6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.3□□□□□ -0.12
Smim4Q8C1Q6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim4Q8C1Q6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim4Q8C1Q6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms