Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim35Q8C006 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Gm5643-201ENSMUST00000117081 966 ntBASIC17.66■□□□□ 0.42
Trim35Q8C006 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim35Q8C006 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.66■□□□□ 0.42
Trim35Q8C006 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim35Q8C006 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim35Q8C006 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim35Q8C006 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim35Q8C006 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim35Q8C006 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Gm26831-201ENSMUST00000181458 1380 ntBASIC17.66■□□□□ 0.42
Trim35Q8C006 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim35Q8C006 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim35Q8C006 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Gm17790-201ENSMUST00000191545 1228 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Gm18692-201ENSMUST00000193047 511 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Ighv10-4-201ENSMUST00000193702 299 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC17.65■□□□□ 0.42
Trim35Q8C006 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim35Q8C006 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim35Q8C006 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim35Q8C006 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim35Q8C006 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.64■□□□□ 0.41
Trim35Q8C006 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim35Q8C006 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim35Q8C006 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim35Q8C006 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim35Q8C006 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trim35Q8C006 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Flg-201ENSMUST00000050758 1488 ntBASIC17.63■□□□□ 0.41
Trim35Q8C006 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Gm13255-201ENSMUST00000117255 547 ntBASIC17.63■□□□□ 0.41
Trim35Q8C006 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim35Q8C006 Gm37845-201ENSMUST00000194977 355 ntBASIC17.63■□□□□ 0.41
Trim35Q8C006 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trim35Q8C006 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Trim35Q8C006 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Gm42479-201ENSMUST00000198654 1356 ntBASIC17.63■□□□□ 0.41
Trim35Q8C006 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim35Q8C006 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim35Q8C006 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim35Q8C006 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms