Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.96■□□□□ 0.47
Trerf1Q8BXJ2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trerf1Q8BXJ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trerf1Q8BXJ2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trerf1Q8BXJ2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trerf1Q8BXJ2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Gm13401-201ENSMUST00000117074 291 ntBASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Gm12382-201ENSMUST00000122005 922 ntBASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trerf1Q8BXJ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm10418-201ENSMUST00000100943 576 ntBASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm11643-201ENSMUST00000119578 864 ntBASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trerf1Q8BXJ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trerf1Q8BXJ2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms