Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp43Q8BUM9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp43Q8BUM9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp43Q8BUM9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp43Q8BUM9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Usp43Q8BUM9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp43Q8BUM9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp43Q8BUM9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.25■□□□□ 0.35
Usp43Q8BUM9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp43Q8BUM9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp43Q8BUM9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.23■□□□□ 0.35
Usp43Q8BUM9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp43Q8BUM9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms