Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cpne3Q8BT60 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cpne3Q8BT60 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Gm42545-201ENSMUST00000202755 922 ntBASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Gm20049-201ENSMUST00000219950 730 ntBASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cpne3Q8BT60 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cpne3Q8BT60 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Gm18025-201ENSMUST00000221733 862 ntBASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cpne3Q8BT60 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Cpne3Q8BT60 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cpne3Q8BT60 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.45■□□□□ 0.22
Cpne3Q8BT60 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne3Q8BT60 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne3Q8BT60 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Cpne3Q8BT60 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms