Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip4Q8BQP8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rab11fip4Q8BQP8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rab11fip4Q8BQP8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab11fip4Q8BQP8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Rab11fip4Q8BQP8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip4Q8BQP8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Gm7889-201ENSMUST00000185591 958 ntBASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip4Q8BQP8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip4Q8BQP8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip4Q8BQP8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip4Q8BQP8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms