Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Smco3Q8BQM7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smco3Q8BQM7 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Gm27454-201ENSMUST00000185090 204 ntBASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.1□□□□□ -0.15
Smco3Q8BQM7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smco3Q8BQM7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smco3Q8BQM7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Gm13146-201ENSMUST00000118508 780 ntBASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Gm13534-201ENSMUST00000121169 513 ntBASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms