Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Gm21814-202ENSMUST00000203277 873 ntBASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Depdc1bQ8BH88 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Depdc1bQ8BH88 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Gm9987-201ENSMUST00000069768 567 ntBASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Depdc1bQ8BH88 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Depdc1bQ8BH88 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Gm6433-201ENSMUST00000118634 875 ntBASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Odf3b-204ENSMUST00000227834 930 ntBASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Depdc1bQ8BH88 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms