Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim23Q8BGX0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim23Q8BGX0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Mir1668-201ENSMUST00000184114 107 ntBASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim23Q8BGX0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Gm27000-201ENSMUST00000182943 842 ntBASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim23Q8BGX0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.41■□□□□ 0.22
Trim23Q8BGX0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim23Q8BGX0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim23Q8BGX0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms