Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm29791-202ENSMUST00000207888 369 ntBASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Haglr-201ENSMUST00000100000 2085 ntBASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Samm50Q8BGH2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.99■□□□□ 0.79
Samm50Q8BGH2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Mir8112-201ENSMUST00000184382 131 ntBASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Samm50Q8BGH2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Mir2861-201ENSMUST00000175539 82 ntBASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.97■□□□□ 0.79
Samm50Q8BGH2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Samm50Q8BGH2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Samm50Q8BGH2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Samm50Q8BGH2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Gm715-201ENSMUST00000117865 831 ntBASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Samm50Q8BGH2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms