Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Gm37025-201ENSMUST00000195159 829 ntBASIC16.63■□□□□ 0.25
Trim50Q810I2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.63■□□□□ 0.25
Trim50Q810I2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim50Q810I2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim50Q810I2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Gm17661-201ENSMUST00000170317 270 ntBASIC16.62■□□□□ 0.25
Trim50Q810I2 Gm3375-201ENSMUST00000203929 796 ntBASIC16.62■□□□□ 0.25
Trim50Q810I2 Gm10252-201ENSMUST00000209541 832 ntBASIC16.62■□□□□ 0.25
Trim50Q810I2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim50Q810I2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim50Q810I2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim50Q810I2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim50Q810I2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim50Q810I2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Gm7638-201ENSMUST00000121348 967 ntBASIC16.6■□□□□ 0.25
Trim50Q810I2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim50Q810I2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.6■□□□□ 0.25
Trim50Q810I2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
Trim50Q810I2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim50Q810I2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim50Q810I2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.6■□□□□ 0.25
Trim50Q810I2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Gm9731-201ENSMUST00000209480 747 ntBASIC16.59■□□□□ 0.25
Trim50Q810I2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trim50Q810I2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim50Q810I2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim50Q810I2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trim50Q810I2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim50Q810I2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim50Q810I2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms