Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Gm27741-201ENSMUST00000185060 237 ntBASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrsam1Q80ZI6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Gm37055-201ENSMUST00000191866 133 ntBASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrsam1Q80ZI6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrsam1Q80ZI6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrsam1Q80ZI6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Lrsam1Q80ZI6 Idnk-204ENSMUST00000226010 1898 ntBASIC18.52■□□□□ 0.55
Lrsam1Q80ZI6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrsam1Q80ZI6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrsam1Q80ZI6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrsam1Q80ZI6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrsam1Q80ZI6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lrsam1Q80ZI6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Lrsam1Q80ZI6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.48■□□□□ 0.55
Lrsam1Q80ZI6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrsam1Q80ZI6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms