Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim36Q80WG7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim36Q80WG7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Gm38285-201ENSMUST00000192928 922 ntBASIC16.47■□□□□ 0.23
Trim36Q80WG7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.47■□□□□ 0.23
Trim36Q80WG7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.47■□□□□ 0.23
Trim36Q80WG7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim36Q80WG7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Zfp783-201ENSMUST00000095946 670 ntBASIC16.46■□□□□ 0.23
Trim36Q80WG7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim36Q80WG7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim36Q80WG7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Mir7071-201ENSMUST00000184847 69 ntBASIC16.45■□□□□ 0.22
Trim36Q80WG7 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.45■□□□□ 0.22
Trim36Q80WG7 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim36Q80WG7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 Gm11927-201ENSMUST00000118472 759 ntBASIC16.44■□□□□ 0.22
Trim36Q80WG7 Gm13158-201ENSMUST00000122007 736 ntBASIC16.44■□□□□ 0.22
Trim36Q80WG7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim36Q80WG7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.44■□□□□ 0.22
Trim36Q80WG7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms