Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 AV026068-213ENSMUST00000223675 1171 ntBASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.76□□□□□ -0.05
Ubr5Q80TP3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ubr5Q80TP3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ubr5Q80TP3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Gm27628-201ENSMUST00000184911 107 ntBASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ubr5Q80TP3 BC021767-201ENSMUST00000126387 1716 ntBASIC14.73□□□□□ -0.05
Ubr5Q80TP3 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ubr5Q80TP3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms