Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh19Q80TF3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh19Q80TF3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh19Q80TF3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh19Q80TF3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh19Q80TF3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdh19Q80TF3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh19Q80TF3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdh19Q80TF3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Gm21362-201ENSMUST00000194272 928 ntBASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdh19Q80TF3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdh19Q80TF3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms