Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pif1Q80SX8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.72■□□□□ 0.11
Pif1Q80SX8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gm10566-201ENSMUST00000086739 996 ntBASIC15.72■□□□□ 0.11
Pif1Q80SX8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pif1Q80SX8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.72■□□□□ 0.11
Pif1Q80SX8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.72■□□□□ 0.11
Pif1Q80SX8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pif1Q80SX8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.71■□□□□ 0.11
Pif1Q80SX8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pif1Q80SX8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.71■□□□□ 0.11
Pif1Q80SX8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pif1Q80SX8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.7■□□□□ 0.1
Pif1Q80SX8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Gm11950-201ENSMUST00000121615 838 ntBASIC15.7■□□□□ 0.1
Pif1Q80SX8 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Gm18669-201ENSMUST00000216049 778 ntBASIC15.7■□□□□ 0.1
Pif1Q80SX8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pif1Q80SX8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.69■□□□□ 0.1
Pif1Q80SX8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.69■□□□□ 0.1
Pif1Q80SX8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Fst-202ENSMUST00000223640 2612 ntBASIC15.69■□□□□ 0.1
Pif1Q80SX8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pif1Q80SX8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.68■□□□□ 0.1
Pif1Q80SX8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Gm6623-201ENSMUST00000173570 544 ntBASIC15.68■□□□□ 0.1
Pif1Q80SX8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pif1Q80SX8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms