Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm27389-201ENSMUST00000183622 195 ntBASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh8Q7TSK3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh8Q7TSK3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh8Q7TSK3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh8Q7TSK3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Idnk-204ENSMUST00000226010 1898 ntBASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Gm10819-201ENSMUST00000099988 561 ntBASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh8Q7TSK3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Pcdh8Q7TSK3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh8Q7TSK3 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh8Q7TSK3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms