Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cspg5Q71M36 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm7638-201ENSMUST00000121348 967 ntBASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm16061-201ENSMUST00000122167 857 ntBASIC17.65■□□□□ 0.42
Cspg5Q71M36 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm27389-201ENSMUST00000183622 195 ntBASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg5Q71M36 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cspg5Q71M36 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cspg5Q71M36 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Cspg5Q71M36 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cspg5Q71M36 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cspg5Q71M36 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.64■□□□□ 0.41
Cspg5Q71M36 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Gm21559-201ENSMUST00000220638 855 ntBASIC17.64■□□□□ 0.41
Cspg5Q71M36 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Gm8587-201ENSMUST00000076538 843 ntBASIC17.64■□□□□ 0.41
Cspg5Q71M36 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg5Q71M36 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.63■□□□□ 0.41
Cspg5Q71M36 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Gm17807-201ENSMUST00000186869 298 ntBASIC17.63■□□□□ 0.41
Cspg5Q71M36 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg5Q71M36 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg5Q71M36 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms