Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Gm4995-201ENSMUST00000117247 432 ntBASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nup188Q6ZQH8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nup188Q6ZQH8 Gm11779-201ENSMUST00000118541 368 ntBASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Gm1401-201ENSMUST00000122048 772 ntBASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Gm44430-201ENSMUST00000203376 995 ntBASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nup188Q6ZQH8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nup188Q6ZQH8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gm8000-201ENSMUST00000188378 592 ntBASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nup188Q6ZQH8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nup188Q6ZQH8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Gm10060-201ENSMUST00000212002 111 ntBASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nup188Q6ZQH8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms