Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Actl10-202ENSMUST00000226583 1501 ntBASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Npc1l1Q6T3U4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Npc1l1Q6T3U4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Npc1l1Q6T3U4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Gm17807-201ENSMUST00000186869 298 ntBASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Npc1l1Q6T3U4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Npc1l1Q6T3U4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Npc1l1Q6T3U4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Npc1l1Q6T3U4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Npc1l1Q6T3U4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
Npc1l1Q6T3U4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms