Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Birc2-201ENSMUST00000054878 378 ntBASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nup98Q6PFD9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nup98Q6PFD9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Nup98Q6PFD9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nup98Q6PFD9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.08■□□□□ 0.8
Nup98Q6PFD9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nup98Q6PFD9 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nup98Q6PFD9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.06■□□□□ 0.8
Nup98Q6PFD9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nup98Q6PFD9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nup98Q6PFD9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Gm15372-201ENSMUST00000120729 834 ntBASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.04■□□□□ 0.8
Nup98Q6PFD9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.03■□□□□ 0.8
Nup98Q6PFD9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nup98Q6PFD9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms