Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Chd4Q6PDQ2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Chd4Q6PDQ2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Gm45203-201ENSMUST00000206384 1831 ntBASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Gm27867-201ENSMUST00000184778 125 ntBASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC22.25■■□□□ 1.15
Chd4Q6PDQ2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Cmtm5-203ENSMUST00000227441 610 ntBASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Chd4Q6PDQ2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Chd4Q6PDQ2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Gm5864-201ENSMUST00000202263 970 ntBASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Chd4Q6PDQ2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gm13884-201ENSMUST00000118103 829 ntBASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gm8969-201ENSMUST00000199694 526 ntBASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gm44430-201ENSMUST00000203376 995 ntBASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC22.21■■□□□ 1.15
Chd4Q6PDQ2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 Gfra2-202ENSMUST00000227633 1480 ntBASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Chd4Q6PDQ2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms