Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ShbQ6PD21 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ShbQ6PD21 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Gm4535-201ENSMUST00000182274 558 ntBASIC18.47■□□□□ 0.55
ShbQ6PD21 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.47■□□□□ 0.55
ShbQ6PD21 Gm44430-201ENSMUST00000203376 995 ntBASIC18.47■□□□□ 0.55
ShbQ6PD21 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.47■□□□□ 0.55
ShbQ6PD21 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Gm10355-201ENSMUST00000097146 517 ntBASIC18.47■□□□□ 0.55
ShbQ6PD21 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ShbQ6PD21 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.46■□□□□ 0.55
ShbQ6PD21 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ShbQ6PD21 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.46■□□□□ 0.55
ShbQ6PD21 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.46■□□□□ 0.55
ShbQ6PD21 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.46■□□□□ 0.55
ShbQ6PD21 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.46■□□□□ 0.55
ShbQ6PD21 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ShbQ6PD21 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ShbQ6PD21 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
ShbQ6PD21 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ShbQ6PD21 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ShbQ6PD21 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ShbQ6PD21 Gm15173-201ENSMUST00000122049 433 ntBASIC18.45■□□□□ 0.54
ShbQ6PD21 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.45■□□□□ 0.54
ShbQ6PD21 Gm25745-201ENSMUST00000174945 133 ntBASIC18.45■□□□□ 0.54
ShbQ6PD21 AV026068-213ENSMUST00000223675 1171 ntBASIC18.45■□□□□ 0.54
ShbQ6PD21 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ShbQ6PD21 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ShbQ6PD21 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.44■□□□□ 0.54
ShbQ6PD21 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.44■□□□□ 0.54
ShbQ6PD21 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.44■□□□□ 0.54
ShbQ6PD21 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.44■□□□□ 0.54
ShbQ6PD21 Gm25911-201ENSMUST00000157621 56 ntBASIC18.44■□□□□ 0.54
ShbQ6PD21 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ShbQ6PD21 Gm6089-201ENSMUST00000197666 938 ntBASIC18.44■□□□□ 0.54
ShbQ6PD21 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.44■□□□□ 0.54
ShbQ6PD21 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ShbQ6PD21 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ShbQ6PD21 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.43■□□□□ 0.54
ShbQ6PD21 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.43■□□□□ 0.54
ShbQ6PD21 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
ShbQ6PD21 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ShbQ6PD21 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ShbQ6PD21 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.43■□□□□ 0.54
ShbQ6PD21 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.43■□□□□ 0.54
ShbQ6PD21 Gm27628-201ENSMUST00000184911 107 ntBASIC18.43■□□□□ 0.54
ShbQ6PD21 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.43■□□□□ 0.54
ShbQ6PD21 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ShbQ6PD21 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms