Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim37Q6PCX9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Trim37Q6PCX9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim37Q6PCX9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trim37Q6PCX9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.89■□□□□ 0.62
Trim37Q6PCX9 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.89■□□□□ 0.62
Trim37Q6PCX9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim37Q6PCX9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim37Q6PCX9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim37Q6PCX9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Gm28659-201ENSMUST00000188013 759 ntBASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim37Q6PCX9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim37Q6PCX9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim37Q6PCX9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms