Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Smarcd3Q6P9Z1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Smarcd3Q6P9Z1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Haglr-201ENSMUST00000100000 2085 ntBASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Smarcd3Q6P9Z1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcd3Q6P9Z1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Smarcd3Q6P9Z1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smarcd3Q6P9Z1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms