Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Hdac4Q6NZM9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Gm13216-201ENSMUST00000117145 591 ntBASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hdac4Q6NZM9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hdac4Q6NZM9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hdac4Q6NZM9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hdac4Q6NZM9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.03■□□□□ 0.64
Hdac4Q6NZM9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hdac4Q6NZM9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms