Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube1Q6NZL8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.44■□□□□ 0.22
Scube1Q6NZL8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Mir5133-201ENSMUST00000174955 77 ntBASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube1Q6NZL8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scube1Q6NZL8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.42■□□□□ 0.22
Scube1Q6NZL8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scube1Q6NZL8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scube1Q6NZL8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms