Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retreg2Q6NS82 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Gm7889-201ENSMUST00000185591 958 ntBASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retreg2Q6NS82 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Gm13559-201ENSMUST00000120476 863 ntBASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg2Q6NS82 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg2Q6NS82 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg2Q6NS82 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.33■□□□□ 0.52
Retreg2Q6NS82 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.33■□□□□ 0.52
Retreg2Q6NS82 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.33■□□□□ 0.52
Retreg2Q6NS82 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg2Q6NS82 Gm10517-202ENSMUST00000192970 758 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms