Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cep290Q6A078 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.42■□□□□ 0.38
Cep290Q6A078 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Gm6089-201ENSMUST00000197666 938 ntBASIC17.42■□□□□ 0.38
Cep290Q6A078 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cep290Q6A078 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.41■□□□□ 0.38
Cep290Q6A078 Gm15173-201ENSMUST00000122049 433 ntBASIC17.41■□□□□ 0.38
Cep290Q6A078 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cep290Q6A078 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cep290Q6A078 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Cep290Q6A078 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.4■□□□□ 0.38
Cep290Q6A078 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.4■□□□□ 0.38
Cep290Q6A078 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.4■□□□□ 0.38
Cep290Q6A078 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.4■□□□□ 0.38
Cep290Q6A078 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cep290Q6A078 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cep290Q6A078 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cep290Q6A078 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cep290Q6A078 Gm14701-201ENSMUST00000117156 348 ntBASIC17.39■□□□□ 0.37
Cep290Q6A078 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.39■□□□□ 0.37
Cep290Q6A078 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cep290Q6A078 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cep290Q6A078 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cep290Q6A078 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cep290Q6A078 Fst-202ENSMUST00000223640 2612 ntBASIC17.39■□□□□ 0.37
Cep290Q6A078 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cep290Q6A078 Gm27321-201ENSMUST00000185021 205 ntBASIC17.38■□□□□ 0.37
Cep290Q6A078 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.38■□□□□ 0.37
Cep290Q6A078 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cep290Q6A078 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cep290Q6A078 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Cep290Q6A078 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cep290Q6A078 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms