Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scube3Q66PY1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Scube3Q66PY1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.9■□□□□ 0.46
Scube3Q66PY1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.9■□□□□ 0.46
Scube3Q66PY1 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.9■□□□□ 0.46
Scube3Q66PY1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scube3Q66PY1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scube3Q66PY1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.88■□□□□ 0.45
Scube3Q66PY1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.88■□□□□ 0.45
Scube3Q66PY1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scube3Q66PY1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Scube3Q66PY1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Gm13474-201ENSMUST00000122466 815 ntBASIC17.87■□□□□ 0.45
Scube3Q66PY1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.87■□□□□ 0.45
Scube3Q66PY1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scube3Q66PY1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.86■□□□□ 0.45
Scube3Q66PY1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.86■□□□□ 0.45
Scube3Q66PY1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scube3Q66PY1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Gm27000-201ENSMUST00000182943 842 ntBASIC17.85■□□□□ 0.45
Scube3Q66PY1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Scube3Q66PY1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms