Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctnna3Q65CL1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctnna3Q65CL1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Mir8112-201ENSMUST00000184382 131 ntBASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Gm18959-201ENSMUST00000208954 655 ntBASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctnna3Q65CL1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Gm23634-201ENSMUST00000175071 91 ntBASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.17■□□□□ 0.66
Ctnna3Q65CL1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctnna3Q65CL1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Gm4974-201ENSMUST00000209974 875 ntBASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctnna3Q65CL1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctnna3Q65CL1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctnna3Q65CL1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.14■□□□□ 0.66
Ctnna3Q65CL1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ctnna3Q65CL1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 AA414768-201ENSMUST00000121924 1257 ntBASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ctnna3Q65CL1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms